Additional file 1: of Full-length transcriptome sequences and the identification of putative genes for flavonoid biosynthesis in safflower
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Table S1. Primers used in RT-PCR. The gene name in our study, forword and reverse primer sequences are listed in the table. Table S2. Sequencing data statistics. The cDNA size, SMRT cells, post-Filter polymerase reads, and post-Filter Subreads N50, et al. are listed in the table. Table S3. Full length sequence data. The number of filtered short reads, number of non-full-length reads, number of full-length reads, et al. are listed in the table. Table S4. Clustering results by ICE. The average consensus isoforms read length, number of polished high-quality isoforms, et al. are listed in the table. Table S5. New Isoform predictions. Table S6. KEGG analyses. Table S7. The flavonoid biosynthesis gene information. The ID of flavonoid biosynthesis gene, the domain by pfam, et al. are listed in the table. Table S8. The flavonoid gene sequence in rice, Arabidopsis thaliana. The ID in NCBI, protein sequence, et al. are listed in the table. Table S9. SSR analysis. Table S10. lncRNA sequences ID. Table S11. ROI statistics. Reads of insert statistics. The cDNA size, the reads of insert, et al. are listed in the table. (XLSX 58 kb)
提供机构:
Ren, Chaoxiang; Tang, Xiaohui; Pei, Jin; Wu, Yiyun; Wei, Bin; Chen, Jiang; Wu, Qinghua
创建时间:
2018-07-25



