Additional file 20: Table S8. of Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays

Suggestive loci (P <0.63) for days to pollen shed (PS), ear height (EH), plant height (PH), and grain yield (GY). Each row reports the phenotype (Trait), the covariates (Cov) eventually used in the QTL scan, the name of the marker (Marker) and chromosome (Chr) of the current association, the genomic position (in bp) of the interval determined by a 2 LOD drop from the highest association (Top), and the left (Left bound) and right (Right bound) bounds of this interval. The percent of variance explained (Variance) and the maximum LOD score are also shown. To avoid duplication, when a peak position was unchanged after scanning with a covariate, the latter scan is the only reported. QTL are listed individually if separated by at least 50 markers with LOD score below the suggestive threshold. (XLSX 14 kb)本数据集涵盖散粉天数（days to pollen shed, PS）、穗位高（ear height, EH）、株高（plant height, PH）及籽粒产量（grain yield, GY）的提示性关联位点（P < 0.63）。表格每行依次记录表型性状（Trait）、数量性状基因座（Quantitative Trait Locus, QTL）扫描时最终采用的协变量（Cov）、当前关联分析的标记名称（Marker）及其所在染色体（Chr）、以最高关联信号处LOD（对数优势比分值）值下降2单位界定的区间基因组位置（单位：bp，记为Top），以及该区间的左边界（Left bound）与右边界（Right bound）。同时记录该位点的表型变异解释率（Variance）与最大LOD分值。为避免重复，当加入协变量扫描后峰值位点未发生改变时，仅保留本次扫描结果。若两个QTL之间至少间隔50个LOD值低于提示性阈值的分子标记，则将其单独分列。（XLSX 14 KB）