Dataset of sequences, alignments and structural models generated for the structural prediction of complexes mediated by intrinsically disordered regions.
收藏资源简介:
This archive contains input and ouput files used and generated for the scanning of intrinsically disordered region and the prediction of their binding sites to receptor proteins. The archive contains 3 directories and a README file detailing their contents : the initial raw sequence and alignment data for every chain -> DIRECTORY <strong>fasta_msa/</strong> the input and output data of every Alphafold run for every complex -> DIRECTORY <strong>af2_runs/</strong> the native reference structures -> DIRECTORY <strong>ref_capri_curated/</strong> The protein-peptide complex cases have been assigned a distinct index number, from 1 to 42, consistent across the several directories of the archive. Their corresponding directories are labelled as <em><index>_<pdbcode></em>. <br> These data can be used to rerun specific sections of the pipeline and scripts provided in: https://github.com/i2bc/SCAN_IDR



