Gold Stamp IDs to SRA IDs convertion of the metagenomes of GEMs
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https://figshare.scilifelab.se/articles/dataset/Gold_Stamp_IDs_to_SRA_IDs_convertion_of_the_metagenomes_of_GEMs/13246817
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资源简介：
A small simple JSON-file containing the mapping from Gold Stamp IDs from the IMG/JGI database to the SRA IDs useable by fastq-dump to download the corresponding metagenomes from NCBI. The GoldIDs are the ones from the Supplemental Table 1 from <i>Nayfach, S., Roux, S., Seshadri, R. et al. A genomic catalog of Earth’s microbiomes. Nat Biotechnol (2020). https://doi.org/10.1038/s41587-020-0718-6</i>, that have been submited to the Short Read Archive. The code used to generate this mapping is available at https://github.com/moritzbuck/jgi2sra_mapper
提供机构：
Swedish University of Agricultural Sciences
创建时间：
2020-11-17
