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Preprocessed gene trees from "Xenolog Classification"

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Scottish Government Open Data Portal2016-10-14 更新2026-05-09 收录
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https://www.research.ed.ac.uk/en/datasets/preprocessed-gene-trees-from-xenolog-classification
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资源简介:
alltreesNewick.zip: 13623 preprocessed trees in Newick format. The start of each filename gives the orthologous group number. Tip labels in trees consist of the protein accession, followed by an underscore, then the three-letter abbreviation for the taxon. Orthologous group numbers and taxon abbreviations are as in Darby et al. (2016, "Xenolog classification", Bioinformatics, submitted) and Latysheva et al. (2012, 10.1093/bioinformatics/bts008). alltreesNotung.zip: 13623 preprocessed trees in Notung format. The start of each filename gives the orthologous group number. Tips are labelled as in alltreesNewick.zip.
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2016-10-14
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