Muntiacus muntjak and Muntiacus reevesi supporting files
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下载链接：
https://datadryad.org/dataset/doi:10.6078/D1KT16
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资源简介：
Available Files: Mmuntjak.cds.fasta.gz - Nucleotide sequences of
the coding regions from M. muntjak gene annotations. Mmuntjak.gff.gz
- Gene annotations for M. muntjak from Gene Model Mapper
(v1.5.3). Mmuntjak.pep.fasta.gz - Peptide sequences of the coding
regions from M. muntjak gene annotations. Mmuntjak.repeat_lib.fasta.gz -
De novo repeats from RepeatModeler (v1.0.11) for M.
muntjak as well as ancestral Cetartiodactyla repeats from RepBase
(downloaded November 8, 2018). Mreevesi.cds.fasta.gz - Nucleotide
sequences of the coding regions from M. reevesi gene annotations.
Mreevesi.gff.gz - Gene annotations for M. reevesi from
Gene Model Mapper (v1.5.3). Mreevesi.pep.fasta.gz - Peptide
sequences of the coding regions from M. reevesi gene annotations.
Mreevesi.repeat_lib.fasta.gz - De novo repeats
from RepeatModeler (v1.0.11) for M. reevesi as well
as ancestral Cetartiodactyla repeats from RepBase (downloaded
November 8, 2018). Muntjac.timetree.nexus - Nexus format phylogenetic tree
derived from phylogenetic tree Muntjac.tree.newick. Divergence time
confidence intervals from TimeTree were input into MEGA7 (v7.0.26), using
the Reltime method and the GTR+Gamma model to create a time tree.
Muntjac.tree.newick - Newick format phylogenetic tree based on fourfold
degenerate sites and constructed with RAxML (v8.2.11) using the GTR+Gamma
model of substitution with outgroup B. taurus.
提供机构：
Dryad
创建时间：
2019-05-15
