Additional file 8 of The derepression of transposable elements in lung cells is associated with the inflammatory response and gene activation in idiopathic pulmonary fibrosis

Additional file 8: Supplemental Table 5. Summary of the differential analysis of the TE loci and genes between the IPF patients and the donors in different cells. A. Whole-lung (WL) tissue, B. Alveolar type II (AT2) cells. C. Alveolar macrophages (AM). The columns represent the gene expression base mean (baseMean), log2 fold change (log2FoldChange), lfcSE (log fold standard error), stat (Wald statistics; lfc/standard error), p-value, p.adj (BH adjusted p-value). The plus and minus signs next to the gene names indicate the gene orientation.