本数据集为龟类进化多样化的基因组研究数据,包含19个代表性龟类基因组的单拷贝直系同源基因、26个龟类物种的二代测序标记,以及系统发育分析结果。数据用于探究龟类进化中的系统发育异质性、基因树-物种树冲突等问题,共17个文件,涵盖对齐序列、基因树、物种树、日志及补充表格等内容。 论文“A genomic perspective on the evolutionary diversification of turtles”
Analysis of all taxa (i.e., in some cases multiple accessions per species), from which a pruned one-tip-per-species tree was used for all downstream ancestral reconstruction analyses. Tip labels for a
This folder contains 8291 newick format trees of Pfams present in prokaryotic taxa. The trees are species-tree reconciled, midpoint rooted and DTL-optimized via GeneRax