Additional file 1 of Unusual sequence characteristics of human chromosome 19 are conserved across 11 nonhuman primates

Additional file 1: Table S1. Human chr19 orthologs. Table S2. Primate genome GC and CpG Content. Table S3. Spearman’s correlation coefficients of chromosome length to GC Content. Table S4. GC content for outgroups at varying liftOver settings. Table S5. GC content and CpG density for chromosome 19 orthologs partitioned into gene cluster and non-gene cluster regions. Table S6. Human Regulatory region CpG Density. Table S7. Human Regulatory region CpG Density partitioned into gene cluster and non-gene cluster regions. Table S8. SNPs in humans, three Old World monkeys and a New World monkey. Table S9. SNPs for chromosome 19 orthologs partitioned into gene cluster and non-gene cluster regions. Table S10. Human Expression Variance Based on GTEx. Table S11. Human Expression Transcripts Per Million (TPM) Based on GTEx. Table S12. Human Expression Index of Dispersion Based on GTEx. Table S13. PhyloP conservation relative to the human genome. Table S14. PhyloP conservation relative to the human genome for regulatory regions. Table S15. PhyloP conservation relative to the human genome for regulatory regions in chromosome 19 cluster and non-cluster regions. Table S16. GREAT results within gene clusters for the phyloP100way dataset for Enhancers, Promoter Flanking, and Promoters showing accelerated nucleotide evolution. Table S17. GREAT results outside of gene clusters for the phyloP100way dataset for Enhancers, Promoter Flanking, and Promoters showing accelerated nucleotide evolution. Table S18. Percent of substitutions in CpGs based on pairwise comparisons to human. Table S19. Mammalian Expression Variance. Table S20. Primate sperm methylome data 1 for promoter, promoter flanking, enhancer and general genomic regions. Table S21. Hypomethylated region average size genomewide and for chromosome 19.