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资源简介：
HiCUP: pipeline for mapping and processing Hi-C data
应用场景：
创建时间：
2015-10-29
相关数据集
Developmental stage specific chromosome architecture in human erythroid cells. Developmental stage specific chromosome architecture in human erythroid cells
This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
NIAID Data Ecosystem80
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
GAMinG script (python) and sequence file (.dat) to prepare files to run molecular dynamics in GROMACS (see ndb.rice.edu for more info regarding how to run the simulations). Two .hic maps and two sampl
NIAID Data Ecosystem50
Spatial genome re-organization between fetal and adult hematopoietic stem cells (ATAC-Seq). Spatial genome re-organization between fetal and adult hematopoietic stem cells (ATAC-Seq)
Fetal hematopoietic stem cells (HSCs) undergo a developmental switch to become adult HSCs. The functional properties of the HSCs change dramatically during this switch, including their cycling behavio
NIAID Data Ecosystem30
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
We investigated genome folding across the eukaryotic tree of life. We find four general manifestations of genome organization at chromosome-scale that each emerge and disappear repeatedly over the cou
NIAID Data Ecosystem60
