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CORAL: probing the structural requirements for α-amylase inhibition activity of 5-(3-arylallylidene)-2-(arylimino)thiazolidin-4-one derivatives based on QSAR with correlation intensity index, molecular docking, molecular dynamics, and ADMET studies

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DataCite Commons2024-11-14 更新2024-08-26 收录
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https://tandf.figshare.com/articles/dataset/CORAL_probing_the_structural_requirements_for_-amylase_inhibition_activity_of_5-_3-arylallylidene_-2-_arylimino_thiazolidin-4-one_derivatives_based_on_QSAR_with_correlation_intensity_index_molecular_docking_molecular_dynamics_and_ADMET_stud/24278634
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The present study aims to examine the structural requirements governing α-amylase inhibitory activity of 5-(3-arylallylidene)-2-(arylimino)thiazolidin-4-one derivatives and their precursors by employing a multifaceted approach combining <i>in vitro</i> and <i>in silico</i> studies. The <i>in vitro</i> assay findings revealed strong inhibitory effect of this class of compounds against α-amylase and compound <b>20</b> exhibited maximum percentage inhibition of 88.54 ± 0.69, 84.98 ± 0.40, 77.26 ± 0.75, 67.80 ± 0.54, and 62.93 ± 1.17 at 200, 100, 50, 25, and 12.5 µg mL<sup>−1</sup>, respectively. Multiple CORAL QSAR models were developed from the randomly distributed eight splits by employing two target functions (TF<sub>1</sub>, TF<sub>2</sub> with W<sub>CII</sub> = 0.0 and = 0.3, respectively), and the quality of predictions by the produced models was validated with the help of various statistical parameters. The model M-4 (<b>R<sup>2</sup><sub>Val</sub> = 0.8799</b>) and model M-11 (<b>R<sup>2</sup><sub>Val</sub> = 0.9064</b>) were the leading models developed by using TF<sub>1</sub> and TF<sub>2</sub>. We designed five new congeneric inhibitors (D-1 to D-5) by incorporating SMILES features positively correlating with the activity. Molecular docking experiments were carried out to confirm the binding of these new inhibitors with the biological receptor α-amylase (<b>PDB ID: 7TAA</b>). Furthermore, molecular dynamic simulations provided a thorough knowledge of the binding process by shedding insight into the dynamic behavior and stability of the ligand-receptor complex over time. The results of this study highlight the key structural characteristics needed for improved α-amylase inhibitory efficacy and provide a rational basis for the development of more effective inhibitors. Communicated by Ramaswamy H. Sarma
提供机构:
Taylor & Francis
创建时间:
2023-10-10
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