Alignments corresponding to the study "Origin and evolution of key enzymes in the anammox pathway revisited".

This is a dataset containing the alignments generated (in FASTA format) via Diamond searches using proteins from “<i>Candidatus</i> Kuenenia stuttgartiensis” that have previously been identified in the anammoxosome and the anammox pathway were used as queries against a dataset constructed using all taxa under the class “<i>Candidatus</i> Brocadiia” in the NCBI taxonomy as of November 2022 (n=227), under the class <i>Brocadiae</i> in the GTDB taxonomy v.207 (n=38), and additional taxa covering all major clades of the PVC (Planctomycetota, Verrucomicrobiota and Chlamydiota) superphylum (n=58).Multiple sequence alignments (MSAs) were calculated using MAFFT L-INS-I v.7.471 and trimmed with trimAl v1.4.1. These alignments were used as input to compute the phylogenetic trees using IQ-Tree v2.2.0 under the best-fitting model selected from LG and WAG.