Supplementary tables for preprint titled: <b>"</b><b>TEA-GCN: Constructing Accurate, Species-comparable, and Explainable Gene Regulatory and Functional Networks via Condition-Specific Ensemble Co-expression" </b>

Supplementary table titles are as follows: Table S1. Performance scores of S. cerevisiae non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects Table S2. Performance scores of A. thaliana non-ensemble PCC GCN, ATTED-II GCN and TEA-GCN across different biological aspects Table S3. Performance scores of H. sapiens non-ensemble PCC GCN, coexpressDB GCN and TEA-GCN across different biological aspects Table S4. Comparison of Met positive edges standardized co-expression strengths from different pathway ontological classes between A. thaliana GCN and ATTED-II GCN Table S5. Performance scores of TEA-GCN constructed from downsampled and batch corrected datasets Table S6. A. thaliana GRN positive edges Table S7. GRN-inference performance scores of downsampled A.thaliana TEA-GCNs, GENIE3 GRN and GRNBoost2 GRN Table S8. Lemma annotations of 444 A. thaliana dataset partitions Table S9. Partition rankings (centralized) of deconvoluted A. thaliana edges-of-interests Table S10. Experimental Contexts discovered for selected TF positive edges Table S11. Enrichment statistics of experimental context lemmas of TF positive edges connecting ABI5 and MS188 Table S12. S. cerevisiae Met positive edges Table S13. A. thaliana Met positive edges Table S14. H. sapiens Met positive edges Table S15. S. cerevisiae TF positive edges Table S16. A. thaliana TF positive edges Table S17. H. sapiens TF positive edges Table S18. S. cerevisiae GO positive edges Table S19. A. thaliana GO positive edges Table S20. H. sapiens GO positive edges Table S21. Met Positive edges of nine Angiosperm species Table S22. S. cerevisiae RNA-seq samples metadata and K-means clustering assignments at different partition granularities Table S23. A. thaliana RNA-seq samples metadata and K-means clustering assignments at different partition granularities Table S24. H. sapiens RNA-seq samples metadata and K-means clustering assignments at different partition granularities Table S25. Creative Commons Attributions for photos used in Figure 7A Table S26. Dataset and TEA-GCN generation information for 9 Angiosperm species