MS-BioGraphs MSA500

https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs/

Name
MS-BioGraphs – MSA500

URL
https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500

Graph Explanation
Vertices represent proteins and each edge represents the sequence similarity between its two endpoints

Edge Weighted
Yes

Directed
Yes

Number of Vertices
1,757,323,526

Number of Edges
1,244,904,754,157

Maximum In-Degree
229,442

Maximum Out-Degree
814,461

Minimum Weight
98

Maximum Weight
634,925

Number of Zero In-Degree Vertices
6,437,984

Number of Zero Out-Degree Vertices
16,843,087

Average In-Degree
711.0

Average Out-Degree
715.3

Size of The Largest Weakly Connected Component
1,244,203,865,823

Number of Weakly Connected Components
148,861,367

Creation Details
MS-BioGraphs: Sequency Similarity Graph Datasets

Format
WebGraph

License
CC BY-NC-SA

QUB IDF
2223-052

DOI
10.5281/zenodo.7820810

Citation

Koohi Esfahani, Mohsen, Boldi, Paolo,
Vandierendonck, Hans, Kilpatrick, Peter,
Vigna,Sebastiano. (2023).
MS-BioGraphs - MSA500.
https://doi.org/10.5281/zenodo.7820810.
http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500.

Bibtex

@misc{MS-BioGraphs-MSA500,
year = {2023},
author = {Mohsen Koohi Esfahani and Paolo Boldi and
Hans Vandierendonck and Peter Kilpatrick and
Sebastiano Vigna},
title = {{MS-BioGraphs - MSA500}},
doi = {10.5281/zenodo.7820810},
url = {http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500},
howpublished= {\url{http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500}}}