遇见数据集

Gut Metagenome Assemblies for Veseli et al. 2023

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NIAID Data Ecosystem2026-05-01 收录
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A collection of anvi'o contigs databases for 408 human fecal metagenome assemblies from the study by Veseli et al. titled "High metabolic independence is a determinant of microbial resilience in the face of gut stress". These are publicly-available gut metagenomes originally obtained from several studies of the gut microbiome. See `METAGENOMES_INFO.txt` file for references and sample SRA accessions. The metagenomes were assembled individually using IDBA-UD as part of the anvi'o metagenomics workflow in anvi'o v7.1-dev. As part of this workflow, they were annotated with KEGG KOfams using `anvi-run-kegg-kofams` and a KEGG snapshot from December 12, 2020 (modules database hash value `45b7cc2e4fdc`). See manuscript and its reproducible workflow for details.

创建时间:
2023-05-10
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