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Complementies strategies encoded by DBD and IDRs direct TF binding

NIAID Data Ecosystem2026-05-01 收录

转录因子结合

ChEC-Seq分析

数据链接：

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE209631 数据链接链接失效反馈

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资源简介：

Profiling TF sequence variants to map their specificity determinants 49 Transcription factors were tagged with MNAse, sequence variants constructed using CRIPSR and profiled using ChEC-Seq

应用场景：

创建时间：

2023-05-04

转录因子结合

SELEX-seq

This project's aim was to describe the in vitro binding specificity of transcription factor DNA-binding domains from the ascidian Ciona robusta, using a high throughput SELEX-seq method.

NIAID Data Ecosystem90

List of genes whose promoters are bound by JUND and PR and the association with TNIL/TL expressed genes.

转录因子结合

基因表达调控

List of genes whose promoters are bound by JUND and PR and the association with TNIL/TL expressed genes.

NIAID Data Ecosystem40

Mammalian ISWI and SWI/SNF selectively mediate binding of distinct groups of transcription factors (RNA-seq data sets). Mammalian ISWI and SWI/SNF selectively mediate binding of distinct groups of transcription factors (RNA-seq data sets)

染色质重塑

转录因子结合

Remodelers define nucleosome composition, presence and position. Mammalian imitation-switch-type (ISWI) comprise one class, mostly relying on the ATPase Snf2h for activity. We show that embryonic stem

NIAID Data Ecosystem30

ChIP-Seq for FOXA2 in PC3 cell line with GSK treatment and VEH control. ChIP-Seq for FOXA2 in PC3 cell line with GSK treatment and VEH control

转录因子结合

前列腺癌表观遗传

We show in prostate cancer cells that LSD1 co-localizes with FOXA1 and active enhancer markers, and that LSD1 inhibition globally disrupts FOXA1 chromatin binding. Overall design: ChIP-Seq of FOXA2 wa

NIAID Data Ecosystem60

Neuroblast-specific open chromatin allows the temporal transcription factor, Hunchback, to bind neuroblast-specific loci

果蝇神经发生

转录因子结合

Integration of spatial and temporal identity during Drosophila neurogenesis is due to spatial factors generating neuroblast-specific chromatin thereby biasing subsequent temporal transcription factor

NIAID Data Ecosystem40

Complementies strategies encoded by DBD and IDRs direct TF binding

资源简介：

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