遇见数据集

Discerning of anti microbial peptides (AMPs) from whole genome sequenced nut crops

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Mendeley Data2021-06-08 更新2026-04-09 收录
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This dataset contains BLAST as well as MACREL predicted AMPs (identified from whole genome sequenced nut crops namely, almond, Chinese chestnut, pecan nut, pistachio nut, walnut) with e-value of <1 and identity percentage ≥ 50. Besides, the data on categorization of the predicted AMPs from the selected whole genome sequenced nut crops based on the key physicochemical properties and the general AMP database (retrieved from DRAMP database) used for blasting against crop protein and MACREL output file were also provided.

本数据集包含经BLAST比对及MACREL工具预测得到的抗菌肽(Antimicrobial Peptides,AMPs),此类抗菌肽从扁桃、中国板栗、山核桃、开心果、核桃这5种已完成全基因组测序的坚果作物中鉴定得到,筛选标准为期望e值(e-value)<1且序列一致性百分比≥50%。此外,本数据集还提供了基于关键理化性质、用于与作物蛋白序列进行BLAST比对的通用抗菌肽数据库(从DRAMP数据库获取)以及MACREL输出文件,对上述选定全基因组测序坚果作物的预测抗菌肽进行分类的相关数据。

创建时间:
2021-06-08
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