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Additional file 2: of Comparative genomics of downy mildews reveals potential adaptations to biotrophy

NIAID Data Ecosystem2026-03-10 收录

数据链接：

https://figshare.com/articles/dataset/Additional_file_2_of_Comparative_genomics_of_downy_mildews_reveals_potential_adaptations_to_biotrophy/7398419 数据链接链接失效反馈

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Intermediate assembly statistics and REAPR scores. (XLSX 24 kb)

应用场景：

创建时间：

2018-11-29

植物病原菌比较基因组

水稻细菌性叶枯病进化研究

Xanthomonas oryzae pv. oryzae is the causal agent of bacterial leaf blight of rice plants. Strain LMG 9585 was isolated in Bolivia. Comparison of its genome sequence with those from Asian and African

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Comparative genomics and phylogenomics of the Ralstonia solanacearum Moko ecotype and its symptomatological variants

植物病原菌比较基因组

青枯菌Moko生态型系统发育

Abstract Banana tree bacterial wilt is caused by the Ralstonia solanacearum Moko ecotype. These strains vary in their symptom progression in banana, and are classified as typical Moko variants (phylot

Figshare2022-12-01 更新40

Assemblathon 1 assembly evaluation and features estimation.

基因组组装评估

生物信息学比较

For each assembler we report the number of contigs/scaffolds produced (Ctg), the NG50, the percentage of short (Chaff) contigs (the percentage is computed with respect to the real genome length), the

NIAID Data Ecosystem30

Comparative study of two closely related genomes of Phyllosticta species. Phyllosticta

柑橘黑斑病

植物病原菌比较基因组

Phyllosticta citricarpa is an important Citrus pathogen responsible for a disease known as Citrus Black Spot. On the other hand, Phyllosticta capitalensis is a non pathogenic endophyte in citrus. The

NIAID Data Ecosystem50

Summary statistics of the assemblies of the cabbage sequence data showing the performances of the multiple-k de novo assemblies.

基因组组装评估

denovo序列分析

1k-mer: Required length of identical overlap match between two reads by Velvet.2N50: Contig length-weighted median.3Average length: length of a contig = the number of contigs/total length.4Max length:

Figshare2015-12-02 更新30

Additional file 2: of Comparative genomics of downy mildews reveals potential adaptations to biotrophy

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