Proteins identified from the black smoker chimney Inferno hydrothermal vent plume meta-proteome - replicate Av1 - on the Axial seamount off the coast of Washington in 2011.
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<p>Proteins identified in the Inferno hydrothermal vent plume meta-proteome (replicate Av1). Only proteins identified by peptides with a protein probability >0.9 are listed. </p> <p>These data are reported as Supplementary Table 3 and discussed in <a href=\"http://dmoserv3.bco-dmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf\" target=\"_blank\">Mattes et al., 2013</a>. (doi:10.1038/ismej.2013.113)</p> <p>The FASTA information in the data was expanded to include the metadata when those FASTA headers were linked to GenBank. </p> <p><em>Proteins that were identified in biological replicate Av2 that were not identified in biological replicate Av1. (GSO: Gamma Sulfur Oxidizer)</em></p> <p><img alt=\"\" src=\"https://datadocs.bco-dmo.org/d3/data_docs/SulfurOxidizers/Table5.png\" style=\"float:left; height:174px; width:637px\" /><br /> </p> <p> </p> <p> </p> <p> </p> <p> </p> <p>\"Although fewer proteins were identified in Av2, nearly all (94%) of the proteins identified in Av2 were also identified in Av1. Differences in the total number of proteins identified in replicate samples may result from differences in the amount of biomass obtained during sample processing.\"</p> <p><strong>DMO notes:</strong><br /> Put multiple FASTA entries on separate lines<br /> Split out one number in FASTA header for linking<br /> Left it sorted by Total Independent Spectra column<br /> Added linkage column<br /> Removed commas in 'consensus annotation' column (signals database to put in new column)<br /> Reordered columns to put KEGG last -- much longer than any other column</p>
<p>本数据集为因弗诺热液喷口羽流宏蛋白质组（meta-proteome）重复样本Av1中鉴定得到的蛋白质。仅列出由置信概率大于0.9的肽段鉴定得到的蛋白质。</p><p>本数据以补充表3的形式呈现，相关讨论详见<a href="http://dmoserv3.bco-dmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf" target="_blank">Mattes等人2013年的研究</a>（DOI: 10.1038/ismej.2013.113）。</p><p>当数据中的FASTA序列标题与GenBank数据库关联时，已将元数据补充至FASTA信息中。</p><p><em>仅在生物学重复样本Av2中鉴定得到、未在Av1中检出的蛋白质。（GSO：伽马硫氧化菌（Gamma Sulfur Oxidizer））</em></p><p><img alt="" src="https://datadocs.bco-dmo.org/d3/data_docs/SulfurOxidizers/Table5.png" style="float:left; height:174px; width:637px" /><br /> </p><p> </p><p> </p><p> </p><p> </p><p>"尽管在Av2中鉴定得到的蛋白质数量更少，但Av2中检出的蛋白质中近94%同样在Av1中被检出。重复样本间鉴定得到的蛋白质总数差异，可能源于样本处理过程中获取的生物量存在差异。"</p><p><strong>DMO备注：</strong><br /> 将多条FASTA条目分行放置<br /> 拆分FASTA序列标题中的单个编号以用于关联<br /> 按Total Independent Spectra列进行排序<br /> 新增关联列<br /> 移除“consensus annotation（一致性注释）”列中的逗号（提示数据库将其拆分至新列中）<br /> 调整列顺序，将京都基因与基因组百科全书（KEGG）置于最后——其列宽远大于其他列</p>
