Fine-scale phylogeography of coastal fishes in the South China Sea: Possible roles of biological traits and geography

This dataset contains input files for a suite of phylogeographic
analyses conducted on several coastal fishes in the South China Sea,
results of which described in the paper "Fine-scale phylogeography of
coastal fishes in the South China Sea: Possible roles of biological traits
and geography", submitted to Journal of Biogeography.
Outline of each analysis is as follows: arlequin:
Estimations of genetic diversity indices and genetic
differentiation using Arlequin. BSP: Reconstruction of historical
demography using a Bayesian skyline plot implemented in
BEAST. MSN: Construction of minimum spanning networks using PopART. BMS:
Testing association between genetic diversity indices and biological
traits by Bayesian Model Averaging using the R package
'bms'.  PCF: Testing association between
phylogeographic patterns and bilogical traits
using Phylogeographic Concordance Factors. See readme.txt in the
folder for each analysis for more detail.