Easy BAM files from practising RNA-seq and exome-seq visualization

Two sets of small BAM files for practising RNA-seq and WES visualization (human) All data was processed from open access SRA datasets. Description: NAME RNA-EMT WES-LUNG SOURCE Yang et al. https://doi.org/10.1128/mcb.00019-16, SRA: PRJNA304419 Ju et al. https://doi.org/10.1101/gr.133645.111; SRA: ERP001071) DESCRIPTION Human RNA-seq BAM files Human WES BAM files: Lung cancer SEQUENCING TYPE Illumina paired-end, stranded Illumina paired-end METHODS Original data are from cell lines subjected to epthithelium-mesenchymal transition. We took replicates corresponding to Day 0 (uninduced cells) and Day 7 (7 days after induction). Reads were aligned with STAR. BAM files are restricted to chromosome 18. Gene of interest: CDH2, up in mesenchymal state. WES were obtained from tumor and blood tissues from a non small cell lung cancer patient. Reads were aligned with BWA. A fraction of sequences corresponding to a panel of genes were retained. Genes of interest: DUSP27, KRAS MAPPED_TO HG19 HG19 SAMPLING RATE 0.50% 0.10% FILE SIZE 2*40Mb 2*7Mb