Breinholt_et_al_degen12_DS2

Dataset 2 (acrossLEP_AHE+PARTtrans). Nexus file containing codon position 1 & 2 for 557 loci and 75 taxa. See taxa_list.txt for species names of each taxon, this is a nucleotide nexus file with a CHARSET that defines each gene that starts with codon position 1. Synonymous signal was removed using degen v1.4 Perl script (http://www.phylotools.com), and the third codon has been removed. Loci names correspond to Loci numbers in the Lep1 enrichment kit included in this DRAYD package. For further information see Breinholt et al. (2017) and Breinholt_et_al_Supplementary_File_1_S1-S11.xlsx in this Dryad package for more details.数据集2（acrossLEP_AHE+PARTtrans）：本文件为Nexus格式序列文件，涵盖75个类群的557个基因座的第1、2密码子位点序列。可通过taxa_list.txt文件查询每个类群对应的物种名称；该核苷酸序列Nexus文件内置CHARSET区块，用于标注以第1密码子位点起始的各基因。已使用degen v1.4 Perl脚本（http://www.phylotools.com）移除同义信号，并剔除了第3密码子位点序列。本数据集的基因座名称与本Dryad数据包中附带的Lep1富集试剂盒（Lep1 enrichment kit）内的基因座编号一一对应。如需获取更多详细信息，请参阅本Dryad数据包中的Breinholt等人（2017）研究文献以及Breinholt_et_al_Supplementary_File_1_S1-S11.xlsx补充文件。