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Oncorhynchus mykiss Transcriptome or Gene expression. Oncorhynchus mykiss

NIAID Data Ecosystem2026-03-09 收录

虹鳟鱼转录组

转录本组装

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA263918 数据链接链接失效反馈

官方服务：

资源简介：

Biosamples were de novo assembled with Trinity. Only transcripts >200 bp were conserved.

应用场景：

创建时间：

2014-10-15

虹鳟鱼转录组

季节性生长

Contigs with higher expression in September fish. FDR significant genes used for the GSEA are highlighted in column E and their associated HGNC symbol is given in column I. (XLSX 270 kb)

NIAID Data Ecosystem70

Numbers of distinct matched genes from reference genomes and mean numbers of best matching representative transcripts for Oases loci and LSTCs.

基因组注释评估

转录本组装

1loci in the reference proteome. 2distinct genomic loci matched by the transcript collections. 3average number of loci in the collection per matched genomic locus.

NIAID Data Ecosystem50

Summary statistics of the individual and the combined transcriptome assemblies.

转录组学

转录本组装

Summary statistics of the individual and the combined transcriptome assemblies.

Figshare2016-09-28 更新40

Alignments of simulated data for PsiCLASS evaluation

转录本组装

RNA测序数据分析

BAM alignment files of simulated RNA-seq data used to evaluate PsiCLASS and other transcript assemblers (archive contains 25 files).

NIAID Data Ecosystem60

Additional file 8: of Single-molecule real-time transcript sequencing facilitates common wheat genome annotation and grain transcriptome research