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TEST_SpliceAI_rocksdb_hg19

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https://zenodo.org/record/7990702
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TEST SpliceAI RocksDB for chromosomes 1 and 2 of hg19 as used in the AbSplice publication: https://www.nature.com/articles/s41588-023-01373-3 Actual precomputed SpliceAI scores for all SNVs and indels up to 4 nucleotides are stored in related entries on Zenodo. To use those databases for fast computation of SpliceAI predictions see: https://github.com/gagneurlab/spliceai_rocksdb This is also implemented in the AbSplice package: https://github.com/gagneurlab/absplice This dataset includes SpliceAI scores. The scores are free for academic and not-for-profit use; other use requires a commercial license from Illumina, Inc., see the GitHub repository of SpliceAI: https://github.com/Illumina/SpliceAI/tree/master
创建时间:
2023-05-31
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