Data for: OsDSSR1, a novel small peptide, enhances drought tolerance in transgenic rice
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RNA-seq analysis was carried out using transgenic lines OX37. Fourteen-day-old rice seedlings were treated with or without 20% solutions of PEG6000 for 6h. Total RNA was isolated with Trizol reagent (Invitrogen, USA) from seedlings of transgenic and 93-11 plants grown under normal or PEG conditions. Material from 10 plants of each genotype was pooled for RNA extraction. The concentration and quality of each RNA sample were determined using a NanoDrop 2000TM micro-volume spectrophotometer (Thermo Scientific, Waltham, MA, USA) and gel electrophoresis. The rice RNA samples were sent to BGI (The Beijing Genomics Institute at Shenzhen, China) for sequencing.
本研究以转基因株系OX37为材料开展RNA测序(RNA-seq)分析。选取14日龄水稻幼苗,分别以20% PEG6000溶液处理6小时,同时设置未施加PEG6000的空白对照组。分别从正常培养及PEG胁迫处理的转基因株系与93-11水稻幼苗中,采用Trizol试剂(美国Invitrogen公司)提取总RNA;每份基因型取10株水稻幼苗的材料混合后进行RNA提取。利用NanoDrop 2000TM超微量分光光度计(美国马萨诸塞州沃尔瑟姆市赛默飞世尔科技公司)及琼脂糖凝胶电泳,检测每份RNA样品的浓度与质量。将提取的水稻总RNA样品送至BGI(中国深圳北京基因组研究所)进行测序。




