Comparison of performance of SubNucPred with Nuc-PLoc, Snlpred and Scp web-servers using Data^IND.

As all Scp, Nuc-Ploc and Snlpred don't have same sub-nuclear locations as in SubNucPred, we adjusted prediction of centromeric, chromosomal and telomeric protein to chromatin and hetrochromatin as correct prediction. Similarly for nuclear envelope and nuclear pore complex a prediction saying nuclear lamina was classified as correct. Values in parenthesis are the number of proteins in that location. $Lei Z, Dai Y (2005) An SVM-based system for predicting protein subnuclear localizations. BMC Bioinformatics 6: 291. &Shen HB, Chou KC (2007) Nuc-PLoc: a new web-server for predicting protein subnuclear localization by fusing PseAA composition and PsePSSM. Protein Eng Des Sel 20: 561–567. #Han GS, Yu ZG, Anh V, Krishnajith AP, Tian YC (2013) An ensemble method for predicting subnuclear localizations from primary protein structures. PLoS One 8: e57225.