Comprehensive dataset of heterogeneous network structures in traditional Chinese medicine research

This dataset presents a comprehensive collection of heterogeneous network structures commonly encountered in biomedical research. The dataset encompasses diverse types of networks, including protein-protein interaction networks, herb-target interaction networks, herb-symptom interaction networks, herb-herb association networks, and symptom-symptom association networks. Each network is represented as a graph, with nodes representing entities such as proteins, herb, symptoms, and efficacy, and edges representing the relationships between these entities. The dataset provides detailed descriptions of the nodes and edges in each network, along with metadata such as node attributes where applicable. This dataset serves as a valuable resource for researchers studying complex biological systems and exploring relationships between various biomedical entities., The dataset is composed of seven files that encompass a range of networks, including protein-protein interactions, herb-target interactions, herb-symptom interactions, herb-herb associations, and symptom-symptom associations. It features three types of nodes: 1,254 herbs, 1,027 symptoms, and 2,208 protein targets. Additionally, the dataset includes five types of associations: 1,912 herb-herb associations, 7,220 symptom-symptom associations, 25,133 protein-protein interactions, 168,797 herb-target associations, and 16,739 herb-symptom associations. Below, you'll find detailed descriptions of the contents contained within these seven files. The first file is a compressed CSV that encompasses data on proteins and herbs. It begins with a header row outlining the dataset's features, followed by rows detailing specific protein-herb interactions. The columns are divided into two segments: the first segment includes attributes related to proteins such as Target ID, Protein Name, Gene Symbol, an..., , # Comprehensive Dataset of Heterogeneous Network Structures in Traditional Chinese Medicine Research [https://doi.org/10.5061/dryad.wh70rxwx9](https://doi.org/10.5061/dryad.wh70rxwx9) ## Description of the data and file structure The dataset is comprised of seven files that encompass a range of networks, including protein-protein interactions, herb-target interactions, herb-symptom interactions, herb-herb associations, and symptom-symptom associations. It features three types of nodes: 1,254 herbs, 1,027 symptoms, and 2,208 protein targets. Additionally, the dataset delineates five types of associations: 1,912 herb-herb associations, 7,220 symptom-symptom associations, 25,133 protein-protein interactions, 168,797 herb-target associations, and 16,739 herb-symptom associations. Below, you'll find detailed descriptions of the contents contained within these seven files. ### Herb target.csv “Herb target.csv” is a compressed CSV that encompasses data on proteins and herbs. It begins wi...本数据集收录了生物医学研究中常见的各类异质网络结构，内容全面详实。数据集涵盖多种类型的网络，包括蛋白质-蛋白质相互作用网络（protein-protein interaction network）、中草药-靶点相互作用网络（herb-target interaction network）、中草药-症状相互作用网络（herb-symptom interaction network）、中草药-中草药关联网络（herb-herb association network）以及症状-症状关联网络（symptom-symptom association network）。每个网络均以图结构表示，其中节点代表蛋白质、中草药、症状及功效等实体，边则代表这些实体间的关联关系。本数据集为每个网络中的节点与边提供了详细说明，并在适用情况下附带节点属性等元数据。本数据集可为研究复杂生物系统、探索各类生物医学实体间关联的科研人员提供宝贵的研究资源。 本数据集包含7个文件，涵盖了蛋白质-蛋白质相互作用、中草药-靶点相互作用、中草药-症状相互作用、中草药-中草药关联以及症状-症状关联等各类网络。数据集包含三类节点：1254种中草药、1027种症状以及2208个蛋白质靶点。此外，数据集涵盖五类关联：1912条中草药-中草药关联、7220条症状-症状关联、25133条蛋白质-蛋白质相互作用、168797条中草药-靶点关联以及16739条中草药-症状关联。下文将详细介绍这7个文件的具体内容。 首个文件为压缩格式的CSV文件，包含蛋白质与中草药相关数据。文件首行为表头，用于说明数据集的特征字段，后续各行则详细记录具体的蛋白质-中草药相互作用信息。列数据分为两个部分：第一部分包含与蛋白质相关的属性，如靶点ID（Target ID）、蛋白质名称（Protein Name）、基因符号（Gene Symbol）等……，# 中医药研究异质网络结构综合数据集 https://doi.org/10.5061/dryad.wh70rxwx9 ## 数据与文件结构说明 本数据集包含7个文件，涵盖了蛋白质-蛋白质相互作用、中草药-靶点相互作用、中草药-症状相互作用、中草药-中草药关联以及症状-症状关联等各类网络。数据集包含三类节点：1254种中草药、1027种症状以及2208个蛋白质靶点。此外，数据集涵盖五类关联：1912条中草药-中草药关联、7220条症状-症状关联、25133条蛋白质-蛋白质相互作用、168797条中草药-靶点关联以及16739条中草药-症状关联。下文将详细介绍这7个文件的具体内容。 ### 中草药-靶点.csv（Herb target.csv） "Herb target.csv"为压缩格式的CSV文件，包含蛋白质与中草药相关数据。文件首行以表头开篇，用于说明数据集的特征字段，后续各行则详细记录具体的蛋白质-中草药相互作用信息。列数据分为两个部分：第一部分包含与蛋白质相关的属性，如靶点ID（Target ID）、蛋白质名称（Protein Name）、基因符号（Gene Symbol）等……