Alignment for single-copy marker gene based phylogenomic reconstruction of Coxiellales, Legionellales and related lineages. Excluding JAJRR01 to test for long branch attraction.
Genomic Encyclopedia of Type Strains, Phase I: one thousand microbial genomes (KMG) project. The goal of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative is to sequence genomes to fi
Pantagruel (Lassalle et al., 2019) was used to infer a maximum-likelihood (ML) “core genome tree” from the concatenated alignments of 291 core-genome genes extracted from the 889 assembled V. cholerae
