ChromSCape_single_cell_ChIP_seq_matrices
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https://figshare.com/articles/dataset/ChromSCape_single_cell_ChIP_seq_matrices/8974250
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Mouse stromal cells from PDX count matrices reformatted to be inputed in ChromSCape (https://github.com/vallotlab/ChromSCape), two of which had not been analyzed in
our previous study (Grosselin et al., 2019, https://www.nature.com/articles/s41588-019-0424-9).
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The
samples correspond to the mouse cells from patient-derived xenograft
(PDX) originating from two different human donors. The HBCx-22 and
HBCx-22-TamR datasets correspond to mouse cells from a pair
of luminal ER+
breast PDXs: HBCx-22, responsive to Tamoxifen and HBCx-22-TamR,
resistant to Tamoxifen. The HBCx-95
and HBCx-95-CapaR
correspond to a triple-negative breast cancer (TNBC) tumor model of
acquired resistance to chemotherapy. Row names of the matrices are 50,000-bp binned regions; Column names are barcodes corresponding to single cell; Cells contains raw counts, in mm10 reference.
创建时间：
2020-02-12
