X-ray microCT lizard brain data and labels. Trained network using Biomedisa with different number of training datasets.

28_pbo24_100kV9WLE2Obj0p4xBin2t1sP801_recon.zip: X-ray tomography data of a lizard head (Podarcis bocagei) using Zeiss Xradia Versa 520 at Stockholm University Brain Imaging Center (SUBIC).SegmFromDLalgorithm.zip: X-ray microCT (microcomputed tomography) data of lizard heads, cropped down to brain part, and the corresponding labels of brain regions segmented by deep learning algorithm.SegmForDLmanual.zip: X-ray microCT data of lizard heads, cropped down to brain part, and the corresponding labels of brain regions segmented semi-manually used as training dataset for deep learning.06_recon.zip: an example of original X-ray microCT data of a lizard head before cropping.The trained networks below can be used in Biomedisa https://biomedisa.info :NetworkTrainedWith5data.tar.h5: trained network using 5 datasetsNetworkTrainedWith7data.tar.h5: trained network using 7 datasetsNetworkTrainedWith9data.tar.h5: trained network using 9 datasetsNetworkTrainedWith11data.tar.h5: trained network using 11 datasets