Refined, automatic nuclei segmentations in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of P7 mouse kidney (jrc_mus-kidney-3)

<b>Segmentation description:</b> Nuclei segmentations in jrc_mus-kidney-3 using Cellpose 2.0 with minimal manual corrections.<b>Software</b>: Cellpose 2.0<b>Software DOI</b>: https://doi.org/10.1038/s41592-022-01663-4<b>GPU: </b>NVIDIA TITAN RTX<b>RAM: </b>768.0 GiB<b>Label voxel size (nm)</b>: 128 x 128 x 128 (x, y, z)<b>Reconstructed data dimensions (µm)</b>: 143.36 x 120.78 x 163.07 (x, y, z)<b>Classes annotated</b>: Nucleus<b>Source dataset (EM) ID</b>: jrc_mus-kidney-3<b>Source dataset (EM) voxel size (nm)</b>: 8 x 8 x 8 (x, y, z)<b>Source dataset (EM) data dimensions (µm)</b>: 143.36 x 120.78 x 163.07 (x, y, z)<b>Source dataset (EM) </b>https://doi.org/10.25378/janelia.24020799<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-kidney-3/jrc_mus-kidney-3.zarr/recon-1/labels/inference/segmentations/nuc/<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-kidney-3<br>