GraphREML Data

Data files for graphREML and graphREML-ST. See https://github.com/oclb/graphld for documentation. Regenerated HM3 EAS and UKBB surrogate marker HDF5 files with GraphLD v1.2.1 coordinate-contract fix. Contents:- genes.tsv: Gene table with symbols, IDs, and genomic coordinates (GRCh38)- baselineld.EAS.genes.h5: Gene-level score statistics for 4 East Asian ancestry GWAS- baselineld.EUR.genes.h5: Gene-level score statistics for 40 European ancestry GWAS- baselineld.EAS.variants.h5: Variant-level score statistics for 4 East Asian ancestry GWAS- baselineld.EUR.variants.h5: Variant-level score statistics for 40 European ancestry GWAS- hm3_surrogates.EAS.h5: HapMap3 surrogate markers for every non-HapMap3 variant in EAS LDGMs, bugfix applied.- hm3_surrogates.UKBB.h5: HapMap3 surrogate markers for every non-HapMap3 variant in UKBB LDGMs, bugfix applied.- ukbb_surrogates.h5: UKBB surrogate markers for every non-UKBB variant in UKBB LDGMs.