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Average proportions of significant SNPs in the simulation study.

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The values in the table represent the proportions of SNPs (averaged over 10 replications) found to be significant. The significance level was set to 0.0001. The results are present for 4 scenarios, which are described in the section: "Evaluation via simulated association studies ". * For these methods in the scenario with 3 underlying discrete subpopulations we took 2 principal components and 2 ancestry estimates, as recommended by the authors. Average proportions of significant SNPs in the simulation study.
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2015-06-22
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