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Table S2, MLST type, dDDH and ANI values with reference genomes

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Figshare2025-04-22 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Table_S2_MLST_type_and_dDDH_values_with_reference_genomes/28815287/4
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Table S2, MLST type, and dDDH and ANI values with reference genomesAverage nucleotide identity (ANI) and dDDH were calculated using the pyani pipeline [12] and the genome-to-genome distance calculator (GGDC, formula 2), respectively. Additionally, Identification of acquired AMR genes, plasmid replicon types, and multilocus sequence types was conducted using the Staramr pipeline (v0.11.0) [12], incorporating ResFinder (database version 06.08.2024), PlasmidFinder (database version 08.08.2024), and MLST (v2.23.0).
提供机构:
Cho, Gyu-Sung; Park, Mi-Kyung; Kim, Su-Hyeon; Franz, Charles M.A.P.; Min Han, Ji
创建时间:
2025-04-22
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