Table S2: microfluidic RT-qPCR assay data for viral genes

Please find attached the file containing the RT-qPCR data for viral gene analysis. Each line correspond to one sample. For each sample you will find the following informations: The sample name (-> "Sample" column) The quantified gene (-> "Genes" column) The raw Ct value (-> "Ct" column") The value of fold change, relative to the pool of all samples analyzed in microfluidic RT-qPCR (-> "FC" column) The time post-infection in hours (-> "Time" column) The viral strain used to infect the cells (-> "Virus" column) The virulence of the strain used to infect the cells (-> "Virulence" column) The biological origin (piglet donor) of the analyzed cells (-> "Pig" column) The classification of the considered viral gene, according to the clustering analysis based on the derivative fold change, as shown in Fig 3 (-> "Cluster" column)