Allele specific expression analysis of 12 olive baboons

Twelve age-matched male baboons were genome sequenced using Illumina PE150 and Oxford Nanopore Technologies (ONT). The Illumina PE150 data was utilized for variant calling, while the long-read ONT data was employed for phasing variants into haplotype blocks. Eleven different tissue types were collected from each of the 12 baboons, and a median of 25 million Illumina PE150 RNA-Seq reads were gathered for each sample. These RNA-Seq reads were then used for conducting genome-wide allele-specific expression (ASE) analysis.