Supplementary data for Microbial communities in two species of sloths

Included files are: Table S1. These data come from running the Kaiju nr_euk database with assembled metagenomes. Table S2. Pivot and interactive table with taxonomy and abundance, from metagenomic sequencing, both sloth species, and Kaiju nr_euk database Table S3. These data come from running the Kaiju fungi database with assembled metagenomes. Table S4. Results of Kraken database search for Bradypus. Table S5. Results of Kraken database search for Choloepus. Table S6. Abundance (#reads) and taxonomy of ITS1 fungi metabarcoding. Table S7. Abundance (#reads) and taxonomy of ITS2 fungi metabarcoding. Table S8. Raw eggNOG-mapper results for Bradypus variegatus, all samples combined, from metagenomic data. Table S9. Raw eggNOG-mapper results for Choloepus hoffmanni, all samples combined, from metagenomic data. Table S10. Summary of eggNOG-mapper functional annotation for metagenomic data for Choloepus and Bradypus. Only fungi and bacteria are included (from Tables S9 and S10). Table S11. Prokaryotic CAZy family abundance (number of sequences: SeqNum, and percentage: SeqNum%) resulting from run_dbcan. CS: C. hoffmani, BS: B. variegatus. The number of predicted genes based on Prokka results were 1,834,836 for CS and 1,164,196 for BS. Table S12. Fungi CAZy family abundance (number of sequences: SeqNum, and percentage: SeqNum%) resulting from run_dbcan. CS: C. hoffmani, BS: B. variegatus. The number of predicted genes based on MetaEuk results were 2,475,095 for CS and 1,604,290 for BS. Out of those, 9,543 were Eukaryota and 3,999 were fungi for CS; and 3,387 Eukaryota and 2,529 fungi for BS.