Optimal flux solutions for all simulated data sets, including the corresponding smallest sum of residual errors (fval) and the constraints for uptake and production rates of metabolites and biomass co
In comparing the published models, standard metabolic inputs of biomass composition and nutrient uptakes were not counted. For Baroukh et al. [26] EFMs refer to elementary flux modes.
Recently, the genomes of two Mycoplasma fermentans strains, namely M64 and JER, have been completely sequenced. Gross comparison indicated that the genome of M64 is significantly bigger than the other
Each reaction in the network was a priori assigned to one of 10 textbook pathways as described in Methods. The pathway assignments are indicated by the color of the reaction vertex in the network. (TR
Release of the Neo4j metabolic interaction database for species human (Homo sapiens) (first unzip before using!). The data is licensed under the CCZero waiver. This file contains data from the followi
