(1)The genome estimation, assemble statistics based on 41-K-mer, assemble statistics based on Illumina and Nanapore sequencing data, BUSCO assessment, GEGMA assessment, Illumina reads coverage, single nucleotide polymorphisms, Repetitive elements, gene function annotations, non-coding RNA prediction, gene families, gene expansion, and gene contraction of a natural diploid kiwifruit (Actinidia chinensis var. deliciosa) (2) Genone annotation file for a natural diploid kiwifruit (Actinidia chinensis var.deliciosa)
收藏Mendeley Data2024-01-31 更新2024-06-27 收录
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Table S1. Genome estimatiion for diploid Actinidia chinensis var. deliciosa; Table S2. Statistics of assembled genome sequences for diploid Actinidia chinensis var. deliciosa based on K-mer=41; Table S3. Statistics of genome of diploid Actinidia chinensis var. deliciosa based on Illumina and Nanapore sequencing data; Table S4. Report of BUSCO resuts for the diploid Actinidia chinensis var. deliciosa genome; Table S5. GEGMA assessment results of diploid Actinidia chinensis var. deliciosa genome; Table S6. Statistics of the Illumina reads coverage in diploid Actinidia chinensis var. deliciosa genome; Table S7. Statistics of the single nucleotide polymorphism of diploid Actinidia chinensis var. deliciosa genome; Table S8. Repetitive elements and their proportions in diploid Actinidia chinensis var. deliciosa genome; Table S9. Statistics of gene function annotations of Actinidia chinensis var. deliciosa genome; Table S10. Statistics of non-coding RNA prediciton for diploid Actinidia chinensis var. deliciosa genome; Table S11. Genes assigned to gene families in diploid Actinidia chinensis var. deliciosa genome; Table S12. Expanded gene familes in GO term; Table S13. Contracted gene families in GO term Genone annotation file for a natural diploid kiwifruit (Actinidia chinensis var.deliciosa)
表S1 二倍体中华猕猴桃美味变种(Actinidia chinensis var. deliciosa)的基因组估算;表S2 基于K-mer=41的二倍体中华猕猴桃美味变种组装基因组序列统计;表S3 基于Illumina和纳米孔(Nanopore)测序数据的二倍体中华猕猴桃美味变种基因组统计;表S4 二倍体中华猕猴桃美味变种基因组的BUSCO结果报告;表S5 二倍体中华猕猴桃美味变种基因组的GEGMA评估结果;表S6 二倍体中华猕猴桃美味变种基因组的Illumina读段覆盖度统计;表S7 二倍体中华猕猴桃美味变种基因组的单核苷酸多态性统计;表S8 二倍体中华猕猴桃美味变种基因组中的重复序列及其占比;表S9 中华猕猴桃美味变种基因组的基因功能注释统计;表S10 二倍体中华猕猴桃美味变种基因组的非编码RNA预测统计;表S11 二倍体中华猕猴桃美味变种基因组中分配至基因家族的基因;表S12 基因本体(GO)术语下的扩张基因家族;表S13 基因本体(GO)术语下的收缩基因家族;天然二倍体猕猴桃(Actinidia chinensis var. deliciosa)的基因组注释文件
创建时间:
2024-01-31



