Risk-reward trade-off during carbon starvation generates dichotomy in motility endurance among marine bacteria

Readme file for the data repository belonging to the manuscript “Risk-reward trade-off in motility endurance generates dichotomy in search strategies among copiotrophic marine bacteria”
by Keegstra and coworkers.
January 2025.

The different zip files each contain a folder with data, scripts and a readme file called readmy_[folder_name].rtf

1. Tracking.zip contains tracking code and analysis including a data file with analysed data used for plotting (Fig 1 and related extended data figures). The trajectory data is stored in five additional zip files (Trajectories_training_part1.zip, Trajectories_training_part2.zip, Trajectories_training_part3,Trajectories_prediction.zip, Trajectories_singlechamber.zip). The trajectory zip files do not contain separate readme files.
2. SEM zip contains Scanning Electron Microscopy images and extracted information on flagellation (Fig 2).
3. CellCount.zip contains flowcytometry data, optical density and colony counting data (Fig 3)
4. Staining.zip contains raw microscopy images and analysis for the storage compound measurements (Extended Data Fig 7).
5. Classifier.zip containing all scripts and data for the classifier (Fig 4 and related extended data figure).
6. DHM.zip containing source files and scripts for plotting quantitative phase imaging data obtained with digital holographic microscopy (Fig 3)