Data to "Contrastive learning on protein embeddings enlightens midnight zone"
收藏NIAID Data Ecosystem2026-05-02 收录
下载链接：
https://zenodo.org/records/14675997
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资源简介：
This is a backup of the data shared as part of the publication Contrastive learning on protein embeddings enlightens midnight zone and the associated github repo.
ProtTucker_ProtT5.pt holds model weights of ProtTucker
prottucker_training_embeddings.tar.gz holds input used to train ProtTucker (i.e., ProtT5 embeddings)
cath-domain-list.txt holds CATH annotation/labels used for training ProtTucker
pdb_seqres_161121.h5 holds pre-computed ProtTucker embeddings for PDB. Useful as lookup DB
scope_2.08_S100.h5 same as PDB_seqres but for SCOPe
sprot_161121.h5 same as PDB_seqres but for SwissProt
cath_v430_dom_seqs_S100_161121.h5 same as PDB_seqres but for CATH_v430
创建时间：
2025-01-20
