ATAC-seq and RNA-seq analysis of Eriocheir sinensis muscle in inter-molt stage

The chromatin accessibility and gene expression of muscle in E. sinensis in inter-molt (C) stage were sequenced by Assay of Transposase Accessible Chromatin sequencing (ATAC-seq) and RNA-seq, respectively. The data was used to analysis the differentially expressed genes (DEGs) in muscle from post-molt to inter-molt by combining ATAC-seq and RNA-seq. Overall design: Muscle of healthy crabs in inter-molt (C stages) were collected and used for ATAC-seq and RNA-seq analysis. In each stages, three muscle samples were collected as the experimental replications. ATAC-seq was performed with Illumina Hiseq platform with E. sinensis genome (accession number PRJNA555707) as the reference genome. RNA-seq was performed with Illumina novaseq platform with E. sinensis genome (accession number PRJNA555707) as the reference genome.