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M2ST: Dissecting spatial domains in spatial transcriptomics by a masked graph attention autoencoder

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Figshare2025-05-12 更新2026-04-28 收录
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https://figshare.com/articles/dataset/_b_M2ST_Dissecting_spatial_domains_in_spatial_transcriptomics_by_a_masked_graph_attention_autoencoder_b_/29036273
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资源简介:
M2ST is implemented in the pytorch framework (tested on Python 3.9.19). We recommend that users run M2ST on CUDA.Tutorial: 1. Download the M2ST_F.py and gat_conv2.py.2. Tutorial for domain identification on 10x Visium human dorsolateral prefrontal cortex (DLPFC) dataset can be found: Train_151674.ipynb.3. The datasets for the Tutorial Train_151674.ipynb can be found in the data/151674 Folder.4. The domain identification results of the Tutorial Train_151674.ipynb can be found in the data/result Folder.
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2025-05-12
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