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ABC Model 5 input files

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DataONE2017-05-19 更新2024-06-26 收录
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Input files for ABC analysis with alternative divergence history of populations. These files were generated using ABCToolkit or manually. The files 'arl_run.txt' and 'arl_run.ars' were used to calculated summary statistics in Arlequin. The file 'hydromantesSTR.obs' contains summary statistics for observed data. The file 'hydromantesSTR.par' contains parameters for the coalescence simulation program simcoal. 'hydromantes.input' is the input file for the program ABCSampler. 'ssDefs.txt' contains information on which summary statistics were calculated. The script 'Process_ABC_commands.R' was used to compare models and determine the posterior probability of each.

用于种群分歧历史备选方案分析的近似贝叶斯计算(Approximate Bayesian Computation,ABC)输入文件。此类文件可通过ABCToolkit生成,亦可手动构建。文件"arl_run.txt"与"arl_run.ars"用于在Arlequin软件中计算汇总统计量;文件"hydromantesSTR.obs"包含观测数据的汇总统计量;文件"hydromantesSTR.par"包含用于溯合模拟程序simcoal的参数配置;文件"hydromantes.input"为程序ABCSampler的输入文件;文件"ssDefs.txt"包含已计算的汇总统计量的相关信息。脚本"Process_ABC_commands.R"用于开展模型比较,并确定各模型的后验概率。

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2017-05-19
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