Table S1 from Integrated Pan-Cancer Map of EBV-Associated Neoplasms Reveals Functional Host–Virus Interactions

A, detail information on all 1342 cancer samples used in this study. B, parts per million (P.P.M.) values for each cancer along with the number of reads that mapped to the EBV genome and the library size after removing low-quality reads and PCR duplicates. C, 56 EBV-integrated loci in the human genome. For each integration (rows), shown are the integration location, the nearest gene and its hg19 coordinates, the number of samples with the integration in each tissue type, and the coordinates of overlapping SEs from genesets shown in Fig. 1E. The total number of EBV+ samples analyzed in each tumor type is indicated in the header row. D, for each sample (rows), shown are the EBV integration location. E, expression (transcripts per million; T.P.M.) of all EBV genes (rows) in each sample (columns).