High impact genetic variants within 22 rice varieties

A high quality polymorphisms dataset of genes and associated variants identified from germline variation calling workflow on the 22 rice varieties targeted in the TRACE-RICE project. Raw sequencing data stored in ENA (PRJEB64146): https://www.ebi.ac.uk/ena/browser/view/PRJEB64146 Raw variant calling file data stored in EVA (PRJEB83571): https://www.ebi.ac.uk/eva/?eva-study=PRJEB83571 Online Resource 1 - Genes within eating quality and seed related QTLs with at least one HIGH impact SNP Whole-genome polymorphisms and phylogeny of rice varieties circulating in the European market (under revision)