A comparison of FoldX energies with experimental values.

The Pearson's correlation coefficients between the FoldX energies and the experimental data are shown.++INDEX denotes a starting position in the 14-residue peptides to select representative fragment sequences for energy evaluation.*SPOT denotes pseudo-binding energies.+MS Model denotes the binding free energies derived from the MS model (MS-model energies).We used 2010 SPOT synthesis data for amphiphysin from reference [12]. We took six consecutive residues in peptide sequences to evaluate the FoldX and MS-model energies.