Data used to simulate artificial phenotypes from human gut metagenomes. We used the same collection of human gut metagenome datasets as in Youngblut et al. (2020), with additional sample exclusio
We investigated the adaptation and succession of microbial communities derived from fecal samples obtained from two different anonymous adult donors using an automated in vitro fermenter over 22 and 3
Additional files used for MAG-based simulations in POMS manuscript. The key files needed are other folders in the collections: https://doi.org/10.6084/m9.figshare.20644362.v1 (for the tables used
In vitro gut modeling is a useful approach to investigate some factors and mechanisms of the gut microbiota independent of the effects of the host. This study tested the use of immobilized fecal micro
