Additional file 2 of Prioritizing genes associated with brain disorders by leveraging enhancer-promoter interactions in diverse neural cells and tissues

Additional file 2: Table S1. Source and information of the CAGE datasets and samples from FANTOM5 project. Table S2. Number of enhancers, promoters and reconstructed EPI in each cell and tissue type. Table S3. Tissue match between the FANTOM5 samples and the cell or tissue types from pcHi-C datasets and GTEx project. Table S4. AUPR scores of the reconstructed EPIs. Table S5. Enhancers with tissue- and stage-specific activity patterns. Table S6. Promoters with tissue- and stage-specific activity patterns. Table S7. Source and information of the GWAS summary statistics used in this study. Table S8. Partitioned LDSC in the CREs of neural cell and tissue types for different brain disorders and behavioral-cognitive phenotypes. Table S9. Collection of known risk genes of 7 different brain disorders. Table S10. Associated genes that were shared between different categories of brain disorders and behavioral-cognitive phenotypes. Table S11. Enriched biological functions of shared associated genes between different categories of brain disorders and behavioral-cognitive phenotypes. Table S12. Spatiotemporal transcriptomic datasets of the human and macaque brains used in this analysis.