PaxDb is a database of protein abundance averages across all three domains of life, which is a meta-resource dedicated to integrating information on absolute protein abundance levels; we place particu
Different codons encoding the same amino acid are not used equally in protein-coding sequences. In bacteria, there is a bias towards codons with high translation rates. This bias is most pronounced in
Complete edgeR results for spectra assigned at the species level by the MEGAN5 LCA, comparing WS vs. NS pairs. The species names assigned by MEGAN5 were derived from the NCBI taxonomy database. The sp
Abundances of proteins identified in the protein corona, calculated using the raw NSAF values, removing non secreted proteins, and re-normalizing remaining data.
